Seminar - The physiology and habitat of LUCA

THE UNIVERSITY OF BRITISH COLUMBIA
Department of Microbiology and Immunology
presents a seminar by:
Dr. William Martin
Professor, Institute for Molecular Evolution, Heinrich-Heine University Düsseldorf, Universitätsstraße 1, Germany
entitled:
The physiology and habitat of LUCA

The concept of a last universal common ancestor of all cells (LUCA, or the progenote) is central to the study of early evolution and life's origin, yet information about how and where LUCA lived is lacking. We investigated all clusters and phylogenetic trees for 6.1 million protein coding genes from sequenced prokaryotic genomes in order to reconstruct the microbial ecology of LUCA. Among 286,514 protein clusters, we identified 355 protein families (~0.1%) that trace to LUCA by phylogenetic criteria. Because these proteins are not universally distributed, they can shed light on LUCA's physiology. Their functions, properties, and prosthetic groups depict LUCA as anaerobic, CO2-fixing, H2-dependent with a Wood-Ljungdahl (WL) pathway, N2-fixing, and thermophilic. LUCA's biochemistry was replete with FeS clusters and radical reaction mechanisms. Its cofactors reveal dependence upon transition metals, flavins, S-adenosyl methionine (SAM), coenzyme A, ferredoxin, molybdopterin, corrins, and selenium. Its genetic code required nucleoside modifications and SAM-dependent methylations. The 355 phylogenies identify clostridia and methanogens, whose modern lifestyles resemble LUCA's, as basal among their respective domains. LUCA inhabited a geochemically active environment rich in H2, CO2, and iron. The data support the theory of an autotrophic origin of life involving the WL. 

Sponsored by:

The Department of Microbiology and Immunology

Tuesday, May 2, 2017 -
12:30pm to 1:30pm

Location:
Life Sciences Centre, LSC 3
2350 Health Sciences Mall
Hosted by
Dr. Thomas Beatty